Hi Adam
This issue seem related to the data directory. You have it externalised
seem. Not really sure if any relation with your initial issue about wroj4.
Check your configuration with
http://geonetwork-opensource.org/manuals/trunk/eng/users/maintainer-guide/installing/customizing-data-directory.html?highlight=external%20data
For example you use for example this format:
-Dgeonetwork.dir=/data/catalogue
You need to make use to change geonetwork, but the name of the
applications, in your case seem geonetwork3:
-Dgeonetwork3.dir=/data/catalogue
Regards,
Jose García
On Wed, Mar 15, 2017 at 10:08 AM, Adam Laža <ad.laza32@anonymised.com> wrote:
Hi,
I tried to comment the value as you suggested and restart but it didn't
help and I got the same error [1]. I found out that this problem occurs if
I try to run two GN instances under Tomcat. I have old version(3.0.1)
called geonetwork. It runs OK. If I deploy new version (3.2.1) war file
called geonetwork2.war in Tomcat both instances are running, old version
works fine and new one throws the error [1]. If I stop old version (which
works fine) and reload the new version I still got the error [1]. However
if I restart Tomcat, both instances are running but this time the new
version works and the old version throws the error[1].
So my question is if it's possible to run two different versions of GN at
the same time and how.
Thanks!
Adam
[1]:
Raised exception while starting the application. Fix the error and restart.
*Message*
org.apache.lucene.store.LockObtainFailedException: Lock obtain timed
out: NativeFSLock@/data/GN/data/index/taxonomy/write.lock:
java.nio.channels.OverlappingFileLockException
*Handler*
org.fao.geonet.Geonetwork
*Exception*
java.lang.RuntimeException:
org.apache.lucene.store.LockObtainFailedException: Lock obtain timed
out: NativeFSLock@/data/GN/data/index/taxonomy/write.lock:
java.nio.channels.OverlappingFileLockException
*Stack*
java.lang.RuntimeException:
org.apache.lucene.store.LockObtainFailedException: Lock obtain timed
out: NativeFSLock@/data/GN/data/index/taxonomy/write.lock:
java.nio.channels.OverlappingFileLockException
at org.fao.geonet.kernel.search.index.LuceneIndexLanguageTracker.
lazyInit(LuceneIndexLanguageTracker.java:68)
at org.fao.geonet.kernel.search.index.LuceneIndexLanguageTracker.
acquire(LuceneIndexLanguageTracker.java:157)
at org.fao.geonet.kernel.search.SearchManager.getIndexReader(
SearchManager.java:1398)
at org.fao.geonet.kernel.search.SearchManager.getNewIndexReader(
SearchManager.java:1402)
at org.fao.geonet.kernel.search.SearchManager.getDocsChangeDate(
SearchManager.java:1057)
at org.fao.geonet.kernel.DataManager.init(DataManager.java:239)
at org.fao.geonet.Geonetwork.start(Geonetwork.java:378)
at jeeves.server.JeevesEngine.initAppHandler(JeevesEngine.
java:452)
at jeeves.server.JeevesEngine.init(JeevesEngine.java:173)
at jeeves.server.sources.http.JeevesServlet.init(
JeevesServlet.java:82)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(
StandardWrapper.java:1231)
at org.apache.catalina.core.StandardWrapper.loadServlet(
StandardWrapper.java:1144)
at org.apache.catalina.core.StandardWrapper.load(
StandardWrapper.java:1031)
at org.apache.catalina.core.StandardContext.loadOnStartup(
StandardContext.java:4914)
at org.apache.catalina.core.StandardContext.startInternal(
StandardContext.java:5201)
at org.apache.catalina.util.LifecycleBase.start(
LifecycleBase.java:150)
at org.apache.catalina.core.StandardContext.reload(
StandardContext.java:3746)
at org.apache.catalina.manager.ManagerServlet.reload(
ManagerServlet.java:1006)
at org.apache.catalina.manager.HTMLManagerServlet.reload(
HTMLManagerServlet.java:614)
at org.apache.catalina.manager.HTMLManagerServlet.doPost(
HTMLManagerServlet.java:215)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:648)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)
at org.apache.catalina.core.ApplicationFilterChain.
internalDoFilter(ApplicationFilterChain.java:291)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(
ApplicationFilterChain.java:206)
at org.apache.catalina.filters.CsrfPreventionFilter.doFilter(
CsrfPreventionFilter.java:213)
at org.apache.catalina.core.ApplicationFilterChain.
internalDoFilter(ApplicationFilterChain.java:239)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(
ApplicationFilterChain.java:206)
at org.apache.tomcat.websocket.server.WsFilter.doFilter(
WsFilter.java:52)
at org.apache.catalina.core.ApplicationFilterChain.
internalDoFilter(ApplicationFilterChain.java:239)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(
ApplicationFilterChain.java:206)
at org.apache.catalina.filters.SetCharacterEncodingFilter.
doFilter(SetCharacterEncodingFilter.java:108)
at org.apache.catalina.core.ApplicationFilterChain.
internalDoFilter(ApplicationFilterChain.java:239)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(
ApplicationFilterChain.java:206)
at org.apache.catalina.core.StandardWrapperValve.invoke(
StandardWrapperValve.java:219)
at org.apache.catalina.core.StandardContextValve.invoke(
StandardContextValve.java:106)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(
AuthenticatorBase.java:614)
at org.apache.catalina.core.StandardHostValve.invoke(
StandardHostValve.java:142)
at org.apache.catalina.valves.ErrorReportValve.invoke(
ErrorReportValve.java:79)
at org.apache.catalina.valves.AbstractAccessLogValve.invoke(
AbstractAccessLogValve.java:616)
at org.apache.catalina.core.StandardEngineValve.invoke(
StandardEngineValve.java:88)
at org.apache.catalina.connector.CoyoteAdapter.service(
CoyoteAdapter.java:518)
at org.apache.coyote.http11.AbstractHttp11Processor.process(
AbstractHttp11Processor.java:1091)
at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.
process(AbstractProtocol.java:673)
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.
doRun(NioEndpoint.java:1526)
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.
run(NioEndpoint.java:1482)
at java.util.concurrent.ThreadPoolExecutor.runWorker(
ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(
ThreadPoolExecutor.java:617)
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(
TaskThread.java:61)
at java.lang.Thread.run(Thread.java:745)
Caused by: org.apache.lucene.store.LockObtainFailedException: Lock
obtain timed out:
NativeFSLock@/data/GN/data/index/taxonomy/write.lock:
java.nio.channels.OverlappingFileLockException
at org.apache.lucene.store.Lock.obtain(Lock.java:89)
at org.apache.lucene.index.IndexWriter.<init>(
IndexWriter.java:724)
at org.apache.lucene.facet.taxonomy.directory.
DirectoryTaxonomyWriter.openIndexWriter(DirectoryTaxonomyWriter.java:265)
at org.apache.lucene.facet.taxonomy.directory.
DirectoryTaxonomyWriter.<init>(DirectoryTaxonomyWriter.java:192)
at org.apache.lucene.facet.taxonomy.directory.
DirectoryTaxonomyWriter.<init>(DirectoryTaxonomyWriter.java:315)
at org.apache.lucene.facet.taxonomy.directory.
DirectoryTaxonomyWriter.<init>(DirectoryTaxonomyWriter.java:332)
at org.fao.geonet.kernel.search.index.TaxonomyIndexTracker.
init(TaxonomyIndexTracker.java:46)
at org.fao.geonet.kernel.search.index.TaxonomyIndexTracker.<
init>(TaxonomyIndexTracker.java:40)
at org.fao.geonet.kernel.search.index.LuceneIndexLanguageTracker.
lazyInit(LuceneIndexLanguageTracker.java:59)
... 49 more
Caused by: java.nio.channels.OverlappingFileLockException
at sun.nio.ch.SharedFileLockTable.checkList(
FileLockTable.java:255)
at sun.nio.ch.SharedFileLockTable.add(FileLockTable.java:152)
at sun.nio.ch.FileChannelImpl.tryLock(FileChannelImpl.java:1108)
at java.nio.channels.FileChannel.tryLock(FileChannel.java:1155)
at org.apache.lucene.store.NativeFSLock.obtain(
NativeFSLockFactory.java:169)
at org.apache.lucene.store.Lock.obtain(Lock.java:96)
... 57 more
2017-03-13 9:47 GMT+01:00 Francois Prunayre <fx.prunayre@anonymised.com>:
> Hi, I would suspect the WRO4J JS & Less cache initialization not
> waiting Tomcat to start completely and failing to init the cache
> properly.
>
> You could try to remove the value in
> https://github.com/geonetwork/core-geonetwork/blob/develop/
> web/src/main/webapp/WEB-INF/config-spring-geonetwork.xml#L120
> and restart.
>
> If it works, it may be something we should improved by default.
>
> HTH
>
> Francois
>
> 2017-03-12 18:39 GMT+01:00 Adam Laža <ad.laza32@anonymised.com>:
> > Hi folks,
> >
> > I'd like to upgrade my GeoNetowork instance from 3.0.1 to current
> version.
> > I use Tomcat 8.0.26 and PostgreSQL 9.6.1. I downloaded WAR file rename
it
> > to geonetwork3 (to distinguish old/new version) and deploy it in
Tomcat.
> > Just after that if i try access servername:8080/geonetwork3/
> > I got this error:
> >
> > FileError:
> > 'servername:8080/geonetwork3/catalog/lib/style/bootstrap-3.
> 0.1/bootstrap.less'
> > wasn't found (404)
> >
> > Then I've edited these files to be same as in old version of GN:
> > webapps/geonetwork/WEB-INF/config-db/jdbc.properties
> > webapps/geonetwork/WEB-INF/config-node/srv.xml
> > webapps/geonetwork/WEB-INF/config.xml
> >
> > but after that it's not possible start GN at Tomcat at all and got this
> > error:
> > FAIL - Application at context path /geonetwork3 could not be started
> >
> > I've tried to google some advice or manual how to upgrade GN but with
no
> > useful results.
> > Could you please give some advice how to upgrade with no data loss?
> >
> > Thanks in advance.
> > Adam
> > ------------------------------------------------------------
> ------------------
> > Announcing the Oxford Dictionaries API! The API offers world-renowned
> > dictionary content that is easy and intuitive to access. Sign up for an
> > account today to start using our lexical data to power your apps and
> > projects. Get started today and enter our developer competition.
> > http://sdm.link/oxford
> > _______________________________________________
> > GeoNetwork-users mailing list
> > GeoNetwork-users@lists.sourceforge.net
> > https://lists.sourceforge.net/lists/listinfo/geonetwork-users
> > GeoNetwork OpenSource is maintained at http://sourceforge.net/
> projects/geonetwork
>
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I tried to keep both version running at the same