[Geoserver-devel] Geoserver 2.12.0 and gdal (EnviHDR import) issue on macOS

Hello,

I’ve problems getting gdal 1.x or gdal 2.2.x with Geoserver 2.12.0 (War-Archive) to succesfully load a ENVIHdr raster file.

The EnviHDR Store is displayed in the “Add new stores” page, but trying to add a raster file it displays the error:
* Could not list layers for this store, an error occurred retrieving them: The Provided input is not supported by this reader

Using macOS 10.11.6 / JAVA SDK 1.8.0_144 / Tried with Tomcat 8.0.47 & Tomcat 8.5.23 / Geoserver 2.12.0 / Tried with gdal 1.15 from Homebrew and gdal-2.2.2

If I do check the status page, the gdal module is succesfully loaded:
http://localhost:8080/geoserver/rest/about/status

• Module name: ImageI/O-Ext GDAL Coverage Extension

• Module : gs-gdal

• Component : GridCoverage2DReader

• Version : 1.1.18

• Enabled : true

• Available : true

• Message : JNI GDAL Wrapper Version: INF/lib/gdal
GDAL Version: 1.11.5
GDAL Release Date: 20160701
GDAL Build Info: PAM_ENABLED=YES
OGR_ENABLED=YES

Checking “catalina.2017-10-18.log” (daily log) file it seems that the gdal native lib is loaded:
18-Oct-2017 16:52:25.302 INFO [localhost-startStop-1] it.geosolutions.imageio.gdalframework.GDALUtilities.loadGDAL GDAL Native Library loaded (version: 1.11.5)

However checking “catalina.out”, I get the following error when pushing the “Save” button from the "Add Raster Data Source / EnviHDR page:

Caused by: java.lang.RuntimeException: The Provided input is not supported by this reader
at it.geosolutions.imageio.gdalframework.GDALImageReader.setInput(GDALImageReader.java:764)
at javax.imageio.ImageReader.setInput(ImageReader.java:380)
at org.geotools.coverageio.BaseGridCoverage2DReader.(BaseGridCoverage2DReader.java:173)
at org.geotools.coverageio.gdal.BaseGDALGridCoverage2DReader.(BaseGDALGridCoverage2DReader.java:84)
at org.geotools.coverageio.gdal.envihdr.EnviHdrReader.(EnviHdrReader.java:68)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:75)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:37)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1506)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1452)
at org.geoserver.catalog.impl.CoverageStoreInfoImpl.getGridCoverageReader(CoverageStoreInfoImpl.java:59)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.geoserver.catalog.impl.ModificationProxy.invoke(ModificationProxy.java:147)
at com.sun.proxy.$Proxy24.getGridCoverageReader(Unknown Source)
at org.geoserver.web.data.layer.NewLayerPageProvider.getItemsInternal(NewLayerPageProvider.java:95)

Tomcat’s setenv.sh contains even the lib path for gdal:

export JAVA_OPTS=“-Djava.library.path=/usr/local/Cellar/gdal/1.11.5_3/lib/”

The “gdal.jar” java-binding from the “Homebrew package manager” was copied in geoserver/WEB-INF/lib along with the files from “gdal 2.12.0 extension”

I even compiled gdal 2.2.2 with java support by myself, with the usual setup (gdal.jar binding etc.) but still same problem…

In fact when it worked back then with geoserver 2.11.2 I wrote myself a tutorial on how to install gdal with geoserver on macOS, see here:

http://www.ecgs.lu/gilles/enabling-gdal-java-binding-for-geoserver-on-macos/

However it doesn’t even work with geoserver 2.11.2 anymore…

Any clues ?

Regards,

Gilles Celli

Hi Giles,

If you have compiled your own version of GDAL, in addition to copying over the gdal.jar, you will also have to remove the existing imageio-ext-gdal-bindings-1.9.2.jar from WEB-INF/lib, otherwise there may be conflicts in the bindings. See here for more details.

For a few releases, including most of 2.11.x, this jar was not included by default, and it was assumed users would copy in the correct bindings jar for their version of GDAL. However, there were complaints, so it was added back in.

This may be what is causing your issue.
If this doesn’t fix it, then it may be a problem with your data.

Also, as a side note, this should have been posted on the user list rather than the developer list.

Torben

···

On Wed, Oct 18, 2017 at 8:01 AM, Gilles Celli <gilles.celli@anonymised.com5…> wrote:

Hello,

I’ve problems getting gdal 1.x or gdal 2.2.x with Geoserver 2.12.0 (War-Archive) to succesfully load a ENVIHdr raster file.

The EnviHDR Store is displayed in the “Add new stores” page, but trying to add a raster file it displays the error:
* Could not list layers for this store, an error occurred retrieving them: The Provided input is not supported by this reader

Using macOS 10.11.6 / JAVA SDK 1.8.0_144 / Tried with Tomcat 8.0.47 & Tomcat 8.5.23 / Geoserver 2.12.0 / Tried with gdal 1.15 from Homebrew and gdal-2.2.2

If I do check the status page, the gdal module is succesfully loaded:
http://localhost:8080/geoserver/rest/about/status

• Module name: ImageI/O-Ext GDAL Coverage Extension

• Module : gs-gdal

• Component : GridCoverage2DReader

• Version : 1.1.18

• Enabled : true

• Available : true

• Message : JNI GDAL Wrapper Version: INF/lib/gdal
GDAL Version: 1.11.5
GDAL Release Date: 20160701
GDAL Build Info: PAM_ENABLED=YES
OGR_ENABLED=YES

Checking “catalina.2017-10-18.log” (daily log) file it seems that the gdal native lib is loaded:
18-Oct-2017 16:52:25.302 INFO [localhost-startStop-1] it.geosolutions.imageio.gdalframework.GDALUtilities.loadGDAL GDAL Native Library loaded (version: 1.11.5)

However checking “catalina.out”, I get the following error when pushing the “Save” button from the "Add Raster Data Source / EnviHDR page:

Caused by: java.lang.RuntimeException: The Provided input is not supported by this reader
at it.geosolutions.imageio.gdalframework.GDALImageReader.setInput(GDALImageReader.java:764)
at javax.imageio.ImageReader.setInput(ImageReader.java:380)
at org.geotools.coverageio.BaseGridCoverage2DReader.(BaseGridCoverage2DReader.java:173)
at org.geotools.coverageio.gdal.BaseGDALGridCoverage2DReader.(BaseGDALGridCoverage2DReader.java:84)
at org.geotools.coverageio.gdal.envihdr.EnviHdrReader.(EnviHdrReader.java:68)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:75)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:37)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1506)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1452)
at org.geoserver.catalog.impl.CoverageStoreInfoImpl.getGridCoverageReader(CoverageStoreInfoImpl.java:59)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.geoserver.catalog.impl.ModificationProxy.invoke(ModificationProxy.java:147)
at com.sun.proxy.$Proxy24.getGridCoverageReader(Unknown Source)
at org.geoserver.web.data.layer.NewLayerPageProvider.getItemsInternal(NewLayerPageProvider.java:95)

Tomcat’s setenv.sh contains even the lib path for gdal:

export JAVA_OPTS=“-Djava.library.path=/usr/local/Cellar/gdal/1.11.5_3/lib/”

The “gdal.jar” java-binding from the “Homebrew package manager” was copied in geoserver/WEB-INF/lib along with the files from “gdal 2.12.0 extension”

I even compiled gdal 2.2.2 with java support by myself, with the usual setup (gdal.jar binding etc.) but still same problem…

In fact when it worked back then with geoserver 2.11.2 I wrote myself a tutorial on how to install gdal with geoserver on macOS, see here:

http://www.ecgs.lu/gilles/enabling-gdal-java-binding-for-geoserver-on-macos/

However it doesn’t even work with geoserver 2.11.2 anymore…

Any clues ?

Regards,

Gilles Celli


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Hello Torben,

Thanks for your quick reply.

Well I forgot to mention that I removed the “imageio-ext-gdal-bindings-1.9.2.jar” java binding from WEB-INF/lib (even tried it out without copying the compiled gdal.jar).

Setting then JAVA_OPTS to point to gdal lib path for Tomcat in setenv.sh have worked for me before…
export JAVA_OPTS=“-Djava.library.path=/usr/local/Cellar/gdal/1.11.5_3/lib/”

Yeah right I’ve read geoserver’s v2.12 changelog that it was actually added back in…

Also, as a side note, this should have been posted on the user list rather than the developer list.

Ah sorry, for that ! Next new thread will be on the user list.

Will re-check everything again tomorrow…something is missing or wrong…

Cheers,

Gilles

···

On Wed, Oct 18, 2017 at 8:01 AM, Gilles Celli <gilles.celli@anonymised.com…4565…> wrote:

Hello,

I’ve problems getting gdal 1.x or gdal 2.2.x with Geoserver 2.12.0 (War-Archive) to succesfully load a ENVIHdr raster file.

The EnviHDR Store is displayed in the “Add new stores” page, but trying to add a raster file it displays the error:
* Could not list layers for this store, an error occurred retrieving them: The Provided input is not supported by this reader

Using macOS 10.11.6 / JAVA SDK 1.8.0_144 / Tried with Tomcat 8.0.47 & Tomcat 8.5.23 / Geoserver 2.12.0 / Tried with gdal 1.15 from Homebrew and gdal-2.2.2

If I do check the status page, the gdal module is succesfully loaded:
http://localhost:8080/geoserver/rest/about/status

• Module name: ImageI/O-Ext GDAL Coverage Extension

• Module : gs-gdal

• Component : GridCoverage2DReader

• Version : 1.1.18

• Enabled : true

• Available : true

• Message : JNI GDAL Wrapper Version: INF/lib/gdal
GDAL Version: 1.11.5
GDAL Release Date: 20160701
GDAL Build Info: PAM_ENABLED=YES
OGR_ENABLED=YES

Checking “catalina.2017-10-18.log” (daily log) file it seems that the gdal native lib is loaded:
18-Oct-2017 16:52:25.302 INFO [localhost-startStop-1] it.geosolutions.imageio.gdalframework.GDALUtilities.loadGDAL GDAL Native Library loaded (version: 1.11.5)

However checking “catalina.out”, I get the following error when pushing the “Save” button from the "Add Raster Data Source / EnviHDR page:

Caused by: java.lang.RuntimeException: The Provided input is not supported by this reader
at it.geosolutions.imageio.gdalframework.GDALImageReader.setInput(GDALImageReader.java:764)
at javax.imageio.ImageReader.setInput(ImageReader.java:380)
at org.geotools.coverageio.BaseGridCoverage2DReader.(BaseGridCoverage2DReader.java:173)
at org.geotools.coverageio.gdal.BaseGDALGridCoverage2DReader.(BaseGDALGridCoverage2DReader.java:84)
at org.geotools.coverageio.gdal.envihdr.EnviHdrReader.(EnviHdrReader.java:68)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:75)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:37)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1506)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1452)
at org.geoserver.catalog.impl.CoverageStoreInfoImpl.getGridCoverageReader(CoverageStoreInfoImpl.java:59)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.geoserver.catalog.impl.ModificationProxy.invoke(ModificationProxy.java:147)
at com.sun.proxy.$Proxy24.getGridCoverageReader(Unknown Source)
at org.geoserver.web.data.layer.NewLayerPageProvider.getItemsInternal(NewLayerPageProvider.java:95)

Tomcat’s setenv.sh contains even the lib path for gdal:

export JAVA_OPTS=“-Djava.library.path=/usr/local/Cellar/gdal/1.11.5_3/lib/”

The “gdal.jar” java-binding from the “Homebrew package manager” was copied in geoserver/WEB-INF/lib along with the files from “gdal 2.12.0 extension”

I even compiled gdal 2.2.2 with java support by myself, with the usual setup (gdal.jar binding etc.) but still same problem…

In fact when it worked back then with geoserver 2.11.2 I wrote myself a tutorial on how to install gdal with geoserver on macOS, see here:

http://www.ecgs.lu/gilles/enabling-gdal-java-binding-for-geoserver-on-macos/

However it doesn’t even work with geoserver 2.11.2 anymore…

Any clues ?

Regards,

Gilles Celli


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Hello,

I finally got the gdal-2.2.2 java-binding to work again with Geoserver.

However it only works with Geoserver 2.12-rc1 but NOT with Geoserver 2.12.0 !!

Comparing both directories 2.12-rc1/WEB-INF/lib and 2.12.0/WEB-INF/lib it seems that the gdal-extension related JAR files “imageio-ext-*-1.18.jar” from version 2.12.0 does have issues…

Geoserver 2.12-rc1 still uses the old imageio-ext-*-1.17.jar and importing ENVIHDR files works!

Note that the “imageio-ext-gdal-bindings-1.9.2.jar” was removed from WEB-INF/lib and replaced with my own compiled “gdal.jar” java binding file in both 2.12-rc1 and 2.12.0

I tried everything possible with 2.12.0 but I really think the gdal extension doesn’t work properly (at least on macOS 10.11.x), it always displays the error:
Caused by: java.lang.RuntimeException: The Provided input is not supported by this reader

Can someone confirm this gdal-import (EnviHDR) issue from 2.12.0 on another platform ?

Regards,

gilles

···

On Wed, Oct 18, 2017 at 8:01 AM, Gilles Celli <gilles.celli@anonymised.com> wrote:

Hello,

I’ve problems getting gdal 1.x or gdal 2.2.x with Geoserver 2.12.0 (War-Archive) to succesfully load a ENVIHdr raster file.

The EnviHDR Store is displayed in the “Add new stores” page, but trying to add a raster file it displays the error:
* Could not list layers for this store, an error occurred retrieving them: The Provided input is not supported by this reader

Using macOS 10.11.6 / JAVA SDK 1.8.0_144 / Tried with Tomcat 8.0.47 & Tomcat 8.5.23 / Geoserver 2.12.0 / Tried with gdal 1.15 from Homebrew and gdal-2.2.2

If I do check the status page, the gdal module is succesfully loaded:
http://localhost:8080/geoserver/rest/about/status

• Module name: ImageI/O-Ext GDAL Coverage Extension

• Module : gs-gdal

• Component : GridCoverage2DReader

• Version : 1.1.18

• Enabled : true

• Available : true

• Message : JNI GDAL Wrapper Version: INF/lib/gdal
GDAL Version: 1.11.5
GDAL Release Date: 20160701
GDAL Build Info: PAM_ENABLED=YES
OGR_ENABLED=YES

Checking “catalina.2017-10-18.log” (daily log) file it seems that the gdal native lib is loaded:
18-Oct-2017 16:52:25.302 INFO [localhost-startStop-1] it.geosolutions.imageio.gdalframework.GDALUtilities.loadGDAL GDAL Native Library loaded (version: 1.11.5)

However checking “catalina.out”, I get the following error when pushing the “Save” button from the "Add Raster Data Source / EnviHDR page:

Caused by: java.lang.RuntimeException: The Provided input is not supported by this reader
at it.geosolutions.imageio.gdalframework.GDALImageReader.setInput(GDALImageReader.java:764)
at javax.imageio.ImageReader.setInput(ImageReader.java:380)
at org.geotools.coverageio.BaseGridCoverage2DReader.(BaseGridCoverage2DReader.java:173)
at org.geotools.coverageio.gdal.BaseGDALGridCoverage2DReader.(BaseGDALGridCoverage2DReader.java:84)
at org.geotools.coverageio.gdal.envihdr.EnviHdrReader.(EnviHdrReader.java:68)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:75)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:37)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1506)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1452)
at org.geoserver.catalog.impl.CoverageStoreInfoImpl.getGridCoverageReader(CoverageStoreInfoImpl.java:59)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.geoserver.catalog.impl.ModificationProxy.invoke(ModificationProxy.java:147)
at com.sun.proxy.$Proxy24.getGridCoverageReader(Unknown Source)
at org.geoserver.web.data.layer.NewLayerPageProvider.getItemsInternal(NewLayerPageProvider.java:95)

Tomcat’s setenv.sh contains even the lib path for gdal:

export JAVA_OPTS=“-Djava.library.path=/usr/local/Cellar/gdal/1.11.5_3/lib/”

The “gdal.jar” java-binding from the “Homebrew package manager” was copied in geoserver/WEB-INF/lib along with the files from “gdal 2.12.0 extension”

I even compiled gdal 2.2.2 with java support by myself, with the usual setup (gdal.jar binding etc.) but still same problem…

In fact when it worked back then with geoserver 2.11.2 I wrote myself a tutorial on how to install gdal with geoserver on macOS, see here:

http://www.ecgs.lu/gilles/enabling-gdal-java-binding-for-geoserver-on-macos/

However it doesn’t even work with geoserver 2.11.2 anymore…

Any clues ?

Regards,

Gilles Celli


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Hello again,

Well forget my previous post: Geoserver 2.12.0 with gdal v2.2.2 imageio 1.1.18 works correctly on my Mac.

My fault and Torben you were correct: bad data!
I tried to import the wrong files from our NAS Discs with a very long path indeed:
The directory contained “.ras” files instead of ENVI “*.hdr” files ! My bad!!

Well, sorry for all the trouble…it shouldn’t happen again :wink:

Cheers,

Gilles

···

On Wed, Oct 18, 2017 at 8:01 AM, Gilles Celli <gilles.celli@anonymised.com> wrote:

Hello,

I’ve problems getting gdal 1.x or gdal 2.2.x with Geoserver 2.12.0 (War-Archive) to succesfully load a ENVIHdr raster file.

The EnviHDR Store is displayed in the “Add new stores” page, but trying to add a raster file it displays the error:
* Could not list layers for this store, an error occurred retrieving them: The Provided input is not supported by this reader

Using macOS 10.11.6 / JAVA SDK 1.8.0_144 / Tried with Tomcat 8.0.47 & Tomcat 8.5.23 / Geoserver 2.12.0 / Tried with gdal 1.15 from Homebrew and gdal-2.2.2

If I do check the status page, the gdal module is succesfully loaded:
http://localhost:8080/geoserver/rest/about/status

• Module name: ImageI/O-Ext GDAL Coverage Extension

• Module : gs-gdal

• Component : GridCoverage2DReader

• Version : 1.1.18

• Enabled : true

• Available : true

• Message : JNI GDAL Wrapper Version: INF/lib/gdal
GDAL Version: 1.11.5
GDAL Release Date: 20160701
GDAL Build Info: PAM_ENABLED=YES
OGR_ENABLED=YES

Checking “catalina.2017-10-18.log” (daily log) file it seems that the gdal native lib is loaded:
18-Oct-2017 16:52:25.302 INFO [localhost-startStop-1] it.geosolutions.imageio.gdalframework.GDALUtilities.loadGDAL GDAL Native Library loaded (version: 1.11.5)

However checking “catalina.out”, I get the following error when pushing the “Save” button from the "Add Raster Data Source / EnviHDR page:

Caused by: java.lang.RuntimeException: The Provided input is not supported by this reader
at it.geosolutions.imageio.gdalframework.GDALImageReader.setInput(GDALImageReader.java:764)
at javax.imageio.ImageReader.setInput(ImageReader.java:380)
at org.geotools.coverageio.BaseGridCoverage2DReader.(BaseGridCoverage2DReader.java:173)
at org.geotools.coverageio.gdal.BaseGDALGridCoverage2DReader.(BaseGDALGridCoverage2DReader.java:84)
at org.geotools.coverageio.gdal.envihdr.EnviHdrReader.(EnviHdrReader.java:68)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:75)
at org.geotools.coverageio.gdal.envihdr.EnviHdrFormat.getReader(EnviHdrFormat.java:37)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1506)
at org.geoserver.catalog.ResourcePool.getGridCoverageReader(ResourcePool.java:1452)
at org.geoserver.catalog.impl.CoverageStoreInfoImpl.getGridCoverageReader(CoverageStoreInfoImpl.java:59)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.geoserver.catalog.impl.ModificationProxy.invoke(ModificationProxy.java:147)
at com.sun.proxy.$Proxy24.getGridCoverageReader(Unknown Source)
at org.geoserver.web.data.layer.NewLayerPageProvider.getItemsInternal(NewLayerPageProvider.java:95)

Tomcat’s setenv.sh contains even the lib path for gdal:

export JAVA_OPTS=“-Djava.library.path=/usr/local/Cellar/gdal/1.11.5_3/lib/”

The “gdal.jar” java-binding from the “Homebrew package manager” was copied in geoserver/WEB-INF/lib along with the files from “gdal 2.12.0 extension”

I even compiled gdal 2.2.2 with java support by myself, with the usual setup (gdal.jar binding etc.) but still same problem…

In fact when it worked back then with geoserver 2.11.2 I wrote myself a tutorial on how to install gdal with geoserver on macOS, see here:

http://www.ecgs.lu/gilles/enabling-gdal-java-binding-for-geoserver-on-macos/

However it doesn’t even work with geoserver 2.11.2 anymore…

Any clues ?

Regards,

Gilles Celli


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