Dear all,
today I have ri-compiled gdal 1.9.1 because i needed to add the Oracle support, and I’ve followed step by step the excellent “how to” listed here: http://www.paolocorti.net/2011/03/22/compiling-gdal-with-oracle-support/
Everything went smooth and the support is working properly.
Problem raises when I ri-compile grass 6.4 svn against gdal (after have run “make distclean” and “svn up”). I use the same configure options I’ve always used before, because I don’t really need the oracle support in grass. BUT now I get the following error:
GRASS GIS compilation log
Started compilation: Wed Aug 8 13:59:04 CEST 2012
Errors in:
/home/leomarg/gis/grass64_release/misc/m.nviz.image
/home/leomarg/gis/grass64_release/vector/v.net.allpairs
/home/leomarg/gis/grass64_release/vector/v.net.bridge
/home/leomarg/gis/grass64_release/vector/v.net.centrality
/home/leomarg/gis/grass64_release/vector/v.net.components
/home/leomarg/gis/grass64_release/vector/v.net.connectivity
/home/leomarg/gis/grass64_release/vector/v.net.distance
/home/leomarg/gis/grass64_release/vector/v.net.flow
/home/leomarg/gis/grass64_release/vector/v.net.spanningtree
/home/leomarg/gis/grass64_release/vector/v.net.timetable
In case of errors please change into the directory with error and run ‘make’.
If you get multiple errors, you need to deal with them in the order they
appear in the error log. If you get an error building a library, you will
also get errors from anything which uses the library.
Finished compilation: Wed Aug 8 14:11:01 CEST 2012
So I go into /home/leomarg/gis/grass64_release/misc/m.nviz.image and run “make”, and it says:
…/…/include/Make/Module.make:25: warning: overriding commands for target install' ../../include/Make/Rules.make:90: warning: ignoring old commands for target install’
gcc -L/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib -Wl,–export-dynamic -Wl,-rpath-link,/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib -o /home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/bin/m.nviz.image OBJ.x86_64-unknown-linux-gnu/args.o OBJ.x86_64-unknown-linux-gnu/cplane.o OBJ.x86_64-unknown-linux-gnu/main.o OBJ.x86_64-unknown-linux-gnu/surface.o OBJ.x86_64-unknown-linux-gnu/vector.o OBJ.x86_64-unknown-linux-gnu/volume.o OBJ.x86_64-unknown-linux-gnu/write_img.o -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_ogsf.6.4.3svn -lgrass_bitmap.6.4.3svn -lgrass_linkm.6.4.3svn -lgrass_g3d.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_sites.6.4.3svn -lgrass_datetime.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_vect.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dgl.6.4.3svn -lgrass_dig2.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_rtree.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_linkm.6.4.3svn -lgrass_rtree.6.4.3svn -lgrass_vect.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dgl.6.4.3svn -lgrass_dig2.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_rtree.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_linkm.6.4.3svn -lgrass_rtree.6.4.3svn -lgrass_nviz.6.4.3svn -lgrass_bitmap.6.4.3svn -lgrass_linkm.6.4.3svn -lgrass_g3d.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_vect.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dgl.6.4.3svn -lgrass_dig2.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_rtree.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_linkm.6.4.3svn -lgrass_rtree.6.4.3svn -lgrass_g3d.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lm -lz
/usr/bin/ld: warning: libclntsh.so.11.1, needed by /home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib/libgrass_ogsf.6.4.3svn.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libnnz11.so, needed by /home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib/libgrass_ogsf.6.4.3svn.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: /home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/bin/m.nviz.image: hidden symbol `stat’ in /usr/lib64/libc_nonshared.a(stat.oS) is referenced by DSO
/usr/bin/ld: final link failed: Nonrepresentable section on output
collect2: ld returned 1 exit status
make: *** [/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/bin/m.nviz.image] Error 1
The questions are:
- Why grass looks for libclntsh.so.11.1 and libnnz11.so? They are actually present on the system and correctly linked to gdal, but I’ve not specified grass to require them (i.e. I did not require the oracle support for grass)
- How can I solve it? where am I supposed to use -rpath or -rpath-link as suggested by the error log?
Thanks in advance
–
Dr. Margherita Di Leo
Sorry I forgot to mention that I’m on Red-Hat
uname -r
2.6.32-279.2.1.el6.x86_64
On Wed, Aug 8, 2012 at 2:37 PM, Margherita Di Leo <dileomargherita@gmail.com> wrote:
Dear all,
today I have ri-compiled gdal 1.9.1 because i needed to add the Oracle support, and I’ve followed step by step the excellent “how to” listed here: http://www.paolocorti.net/2011/03/22/compiling-gdal-with-oracle-support/
Everything went smooth and the support is working properly.
Problem raises when I ri-compile grass 6.4 svn against gdal (after have run “make distclean” and “svn up”). I use the same configure options I’ve always used before, because I don’t really need the oracle support in grass. BUT now I get the following error:
GRASS GIS compilation log
Started compilation: Wed Aug 8 13:59:04 CEST 2012
Errors in:
/home/leomarg/gis/grass64_release/misc/m.nviz.image
/home/leomarg/gis/grass64_release/vector/v.net.allpairs
/home/leomarg/gis/grass64_release/vector/v.net.bridge
/home/leomarg/gis/grass64_release/vector/v.net.centrality
/home/leomarg/gis/grass64_release/vector/v.net.components
/home/leomarg/gis/grass64_release/vector/v.net.connectivity
/home/leomarg/gis/grass64_release/vector/v.net.distance
/home/leomarg/gis/grass64_release/vector/v.net.flow
/home/leomarg/gis/grass64_release/vector/v.net.spanningtree
/home/leomarg/gis/grass64_release/vector/v.net.timetable
In case of errors please change into the directory with error and run ‘make’.
If you get multiple errors, you need to deal with them in the order they
appear in the error log. If you get an error building a library, you will
also get errors from anything which uses the library.
Finished compilation: Wed Aug 8 14:11:01 CEST 2012
So I go into /home/leomarg/gis/grass64_release/misc/m.nviz.image and run “make”, and it says:
…/…/include/Make/Module.make:25: warning: overriding commands for target install' ../../include/Make/Rules.make:90: warning: ignoring old commands for target install’
gcc -L/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib -Wl,–export-dynamic -Wl,-rpath-link,/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib -o /home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/bin/m.nviz.image OBJ.x86_64-unknown-linux-gnu/args.o OBJ.x86_64-unknown-linux-gnu/cplane.o OBJ.x86_64-unknown-linux-gnu/main.o OBJ.x86_64-unknown-linux-gnu/surface.o OBJ.x86_64-unknown-linux-gnu/vector.o OBJ.x86_64-unknown-linux-gnu/volume.o OBJ.x86_64-unknown-linux-gnu/write_img.o -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_ogsf.6.4.3svn -lgrass_bitmap.6.4.3svn -lgrass_linkm.6.4.3svn -lgrass_g3d.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_sites.6.4.3svn -lgrass_datetime.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_vect.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dgl.6.4.3svn -lgrass_dig2.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_rtree.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_linkm.6.4.3svn -lgrass_rtree.6.4.3svn -lgrass_vect.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dgl.6.4.3svn -lgrass_dig2.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_rtree.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_linkm.6.4.3svn -lgrass_rtree.6.4.3svn -lgrass_nviz.6.4.3svn -lgrass_bitmap.6.4.3svn -lgrass_linkm.6.4.3svn -lgrass_g3d.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_vect.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_dgl.6.4.3svn -lgrass_dig2.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_rtree.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_linkm.6.4.3svn -lgrass_rtree.6.4.3svn -lgrass_g3d.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lm -lz
/usr/bin/ld: warning: libclntsh.so.11.1, needed by /home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib/libgrass_ogsf.6.4.3svn.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libnnz11.so, needed by /home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib/libgrass_ogsf.6.4.3svn.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: /home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/bin/m.nviz.image: hidden symbol `stat’ in /usr/lib64/libc_nonshared.a(stat.oS) is referenced by DSO
/usr/bin/ld: final link failed: Nonrepresentable section on output
collect2: ld returned 1 exit status
make: *** [/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/bin/m.nviz.image] Error 1
The questions are:
- Why grass looks for libclntsh.so.11.1 and libnnz11.so? They are actually present on the system and correctly linked to gdal, but I’ve not specified grass to require them (i.e. I did not require the oracle support for grass)
- How can I solve it? where am I supposed to use -rpath or -rpath-link as suggested by the error log?
Thanks in advance
–
Dr. Margherita Di Leo
–
Dr. Margherita Di Leo
What does gdalinfo --formats say?
When you compile GRASS with gdal, all the libraries that gdal needs
must be in the library path, even if GRASS itself does not link to
them directly. Therefore I guess that gdalinfo --formats and ogrinfo
--formats are currently not working on your system. Correct?
HTH,
Markus M
On Thu, Aug 9, 2012 at 9:04 AM, Margherita Di Leo
<dileomargherita@gmail.com> wrote:
Sorry I forgot to mention that I'm on Red-Hat
uname -r
2.6.32-279.2.1.el6.x86_64
On Wed, Aug 8, 2012 at 2:37 PM, Margherita Di Leo
<dileomargherita@gmail.com> wrote:
Dear all,
today I have ri-compiled gdal 1.9.1 because i needed to add the Oracle
support, and I've followed step by step the excellent "how to" listed here:
http://www.paolocorti.net/2011/03/22/compiling-gdal-with-oracle-support/
Everything went smooth and the support is working properly.
Problem raises when I ri-compile grass 6.4 svn against gdal (after have
run "make distclean" and "svn up"). I use the _same configure options I've
always used before_, because I don't really need the oracle support in
grass. BUT now I get the following error:
GRASS GIS compilation log
-------------------------
Started compilation: Wed Aug 8 13:59:04 CEST 2012
--
Errors in:
/home/leomarg/gis/grass64_release/misc/m.nviz.image
/home/leomarg/gis/grass64_release/vector/v.net.allpairs
/home/leomarg/gis/grass64_release/vector/v.net.bridge
/home/leomarg/gis/grass64_release/vector/v.net.centrality
/home/leomarg/gis/grass64_release/vector/v.net.components
/home/leomarg/gis/grass64_release/vector/v.net.connectivity
/home/leomarg/gis/grass64_release/vector/v.net.distance
/home/leomarg/gis/grass64_release/vector/v.net.flow
/home/leomarg/gis/grass64_release/vector/v.net.spanningtree
/home/leomarg/gis/grass64_release/vector/v.net.timetable
--
In case of errors please change into the directory with error and run
'make'.
If you get multiple errors, you need to deal with them in the order they
appear in the error log. If you get an error building a library, you will
also get errors from anything which uses the library.
--
Finished compilation: Wed Aug 8 14:11:01 CEST 2012
So I go into /home/leomarg/gis/grass64_release/misc/m.nviz.image and run
"make", and it says:
../../include/Make/Module.make:25: warning: overriding commands for target
`install'
../../include/Make/Rules.make:90: warning: ignoring old commands for
target `install'
gcc -L/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib
-Wl,--export-dynamic
-Wl,-rpath-link,/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib
-o
/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/bin/m.nviz.image
OBJ.x86_64-unknown-linux-gnu/args.o OBJ.x86_64-unknown-linux-gnu/cplane.o
OBJ.x86_64-unknown-linux-gnu/main.o OBJ.x86_64-unknown-linux-gnu/surface.o
OBJ.x86_64-unknown-linux-gnu/vector.o OBJ.x86_64-unknown-linux-gnu/volume.o
OBJ.x86_64-unknown-linux-gnu/write_img.o -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_ogsf.6.4.3svn
-lgrass_bitmap.6.4.3svn -lgrass_linkm.6.4.3svn -lgrass_g3d.6.4.3svn
-lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_sites.6.4.3svn
-lgrass_datetime.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_dbmiclient.6.4.3svn
-lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_vect.6.4.3svn
-lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_dgl.6.4.3svn
-lgrass_dig2.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_rtree.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_linkm.6.4.3svn -lgrass_rtree.6.4.3svn -lgrass_vect.6.4.3svn
-lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_dgl.6.4.3svn
-lgrass_dig2.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_rtree.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_linkm.6.4.3svn -lgrass_rtree.6.4.3svn -lgrass_nviz.6.4.3svn
-lgrass_bitmap.6.4.3svn -lgrass_linkm.6.4.3svn -lgrass_g3d.6.4.3svn
-lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_vect.6.4.3svn
-lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_dbmiclient.6.4.3svn -lgrass_dbmibase.6.4.3svn -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_gis.6.4.3svn
-lgrass_datetime.6.4.3svn -lz -lgrass_dgl.6.4.3svn
-lgrass_dig2.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_rtree.6.4.3svn -lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz
-lgrass_linkm.6.4.3svn -lgrass_rtree.6.4.3svn -lgrass_g3d.6.4.3svn
-lgrass_gis.6.4.3svn -lgrass_datetime.6.4.3svn -lz -lm -lz
/usr/bin/ld: warning: libclntsh.so.11.1, needed by
/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib/libgrass_ogsf.6.4.3svn.so,
not found (try using -rpath or -rpath-link)
/usr/bin/ld: warning: libnnz11.so, needed by
/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/lib/libgrass_ogsf.6.4.3svn.so,
not found (try using -rpath or -rpath-link)
/usr/bin/ld:
/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/bin/m.nviz.image:
hidden symbol `stat' in /usr/lib64/libc_nonshared.a(stat.oS) is referenced
by DSO
/usr/bin/ld: final link failed: Nonrepresentable section on output
collect2: ld returned 1 exit status
make: ***
[/home/leomarg/gis/grass64_release/dist.x86_64-unknown-linux-gnu/bin/m.nviz.image]
Error 1
The questions are:
1) Why grass looks for libclntsh.so.11.1 and libnnz11.so? They are
actually present on the system and correctly linked to gdal, but I've not
specified grass to require them (i.e. I did not require the oracle support
for grass)
2) How can I solve it? where am I supposed to use -rpath or -rpath-link
as suggested by the error log?
Thanks in advance
--
Dr. Margherita Di Leo
--
Dr. Margherita Di Leo
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