I have installed the OGC API for Geoserver and I can view, using REST services, all the collections that I previously created as layers. To create additional collections, do I need to use Geoserver Data Stores and create and publish layers, or can I create additional collections with the OGC API without going back to Geoserver?
Glad you are enjoying OGC API:
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OGC API is a new protocol for feature access alongside WFS. It is used to access content. It happens to be based on REST and JSON but the point is to access content.
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GeoServer configuration (workspaces, datastore, layers) remains unchanged and can be configured via the Admin Console or REST API.